Temporarily removing Stripe as a payment option is a quick and easy process. All you need to do is go to settings and toggle the Stripe switch off in your payment window.

Stripe will then be immediately removed from all of your invoices. You can then toggle this switch back on when you're ready start receiving payments with Stripe again. This option is also available to you directly on your invoice edit screen.
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You can also toggle specific payment methods off while leaving other payment methods on. To do this, tap the Stripe box in your payment settings. You will see a listing of your available payment methods.

Simply toggle which payment methods you want to deactivate off. They will me instantly removed from all current invoices.